Uḡur Doḡrusöz: search on Z-Library

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1

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || A Fast Set Intersection Algorithm for Sorted Sequences

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 162 KB

english, 2004

2

LibSBGN: Electronic Processing of SBGN maps

Demir, Emek, Dogrusoz, Ugur, Le Novère, Nicolas, Matsuoka, Yukiko, Sorokin, Anatoly, Funahashi, Akira, Mi, Huaiyu, Kitano, Hiroaki, Aladjem, Mirit, van Iersel, Martijn, Blinov, Michael, Boyd, Sarah, V

Journal:

Bioentrepreneur

Year:

2010

File:

PDF, 1.38 MB

2010

3

cd2sbgnml: bidirectional conversion between CellDesigner and SBGN formats

Balaur, Irina, Roy, Ludovic, Mazein, Alexander, Karaca, S Gökberk, Dogrusoz, Ugur, Barillot, Emmanuel, Zinovyev, Andrei, Valencia, Alfonso

Journal:

Year:

2020

File:

PDF, 248 KB

2020

4

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Approximate String Matching Using Compressed Suffix Arrays

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 216 KB

english, 2004

5

Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0

Rougny, Adrien, Touré, Vasundra, Moodie, Stuart, Balaur, Irina, Czauderna, Tobias, Borlinghaus, Hanna, Dogrusoz, Ugur, Mazein, Alexander, Dräger, Andreas, Blinov, Michael L., Villéger, Alice, Haw, Rob

Journal:

Journal of Integrative Bioinformatics

Language:

english

File:

PDF, 2.31 MB

english

6

Two-dimensional packing algorithms for layout of disconnected graphs

Journal:

Information Sciences

Year:

2002

Language:

english

File:

PDF, 465 KB

english, 2002

7

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Approximate String Matching Using Compressed Suffix Arrays

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

File:

PDF, 216 KB

2004

8

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Small Phylogeny Problem: Character Evolution Trees

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

File:

PDF, 206 KB

2004

9

LibSBGN: Electronic Processing of SBGN maps

Demir, Emek, Dogrusoz, Ugur, Le Novère, Nicolas, Matsuoka, Yukiko, Sorokin, Anatoly, Funahashi, Akira, Mi, Huaiyu, Kitano, Hiroaki, Aladjem, Mirit, van Iersel, Martijn, Blinov, Michael, Boyd, Sarah, V

Journal:

Bioentrepreneur

Year:

2011

File:

PDF, 1.40 MB

2011

10

Newt: a comprehensive web-based tool for viewing, constructing, and analyzing biological maps

Balci, Hasan, Siper, Metin Can, Saleh, Nasim, Safarli, Ilkin, Roy, Ludovic, Kilicarslan, Merve, Ozaydin, Rumeysa, Mazein, Alexander, Auffray, Charles, Babur, ÃzgÃ¼n, Demir, Emek, Dogrusoz, Ugur, Wren

Journal:

Year:

2020

File:

PDF, 260 KB

2020

11

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Maximal Common Connected Sets of Interval Graphs

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 238 KB

english, 2004

12

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Finding Biclusters by Random Projections

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 267 KB

english, 2004

13

[IEEE 2018 26th Signal Processing and Communications Applications Conference (SIU) - Izmir, Turkey (2018.5.2-2018.5.5)] 2018 26th Signal Processing and Communications Applications Conference (SIU) - Effect of input size on the classification of lung nodules using convolutional neural networks

Polat, Gorkem, Dogrusoz, Yecim Serinagaoglu, Halici, Ugur

Year:

2018

Language:

turkish

File:

PDF, 409 KB

turkish, 2018

14

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Reversal Distance without Hurdles and Fortresses

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 175 KB

english, 2004

15

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || On the Average Sequence Complexity

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 260 KB

english, 2004

16

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || A Computational Model for RNA Multiple Structural Alignment

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 452 KB

english, 2004

17

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Improved Single and Multiple Approximate String Matching

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

File:

PDF, 372 KB

2004

18

Algorithms for effective querying of compound graph-based pathway databases

Ugur Dogrusoz, Ahmet Cetintas, Emek Demir, Ozgun Babur

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 2.24 MB

english, 2009

19

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || A Combinatorial Shape Matching Algorithm for Rigid Protein Docking

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 830 KB

english, 2004

20

Efficient methods and readily customizable libraries for managing complexity of large networks

Dogrusoz, Ugur, Karacelik, Alper, Safarli, Ilkin, Balci, Hasan, Dervishi, Leonard, Siper, Metin Can, Bourdon, Jérémie

Journal:

Year:

2018

Language:

english

File:

PDF, 7.28 MB

english, 2018

21

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Quadratic Time Algorithms for Finding Common Intervals in Two and More Sequences

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 242 KB

english, 2004

22

A layout algorithm for undirected compound graphs

Ugur Dogrusoz, Erhan Giral, Ahmet Cetintas, Ali Civril, Emek Demir

Journal:

Information Sciences

Year:

2009

Language:

english

File:

PDF, 1.26 MB

english, 2009

23

Preface

Suleyman Cenk Sahinalp, Ugur Dogrusoz, S. Muthukrishnan

Journal:

Theoretical Computer Science

Year:

2006

Language:

english

File:

PDF, 82 KB

english, 2006

24

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Approximate Labelled Subtree Homeomorphism

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 392 KB

english, 2004

25

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Average-Case Analysis of Approximate Trie Search

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 213 KB

english, 2004

26

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Multi-seed Lossless Filtration

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 226 KB

english, 2004

27

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || New Results for the 2-Interval Pattern Problem

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 252 KB

english, 2004

28

PathwayMapper: a collaborative visual web editor for cancer pathways and genomic data

Bahceci, Istemi, Dogrusoz, Ugur, La, Konnor C., Babur, Özgün, Gao, Jianjiong, Schultz, Nikolaus

Journal:

Year:

2017

Language:

english

File:

PDF, 396 KB

english, 2017

29

Community-driven roadmap for integrated disease maps

Ostaszewski, Marek, Gebel, Stephan, Kuperstein, Inna, Mazein, Alexander, Zinovyev, Andrei, Dogrusoz, Ugur, Hasenauer, Jan, Fleming, Ronan M T, Le Novère, Nicolas, Gawron, Piotr, Ligon, Thomas, Niaraki

Journal:

Briefings in Bioinformatics

Year:

2018

Language:

english

File:

PDF, 730 KB

english, 2018

30

LibSBGN: Electronic Processing of SBGN maps

Demir, Emek, Dogrusoz, Ugur, Le Novère, Nicolas, Matsuoka, Yukiko, Sorokin, Anatoly, Funahashi, Akira, Mi, Huaiyu, Kitano, Hiroaki, Aladjem, Mirit, van Iersel, Martijn, Blinov, Michael, Boyd, Sarah, V

Journal:

Bioentrepreneur

Year:

2010

Language:

english

File:

PDF, 1.38 MB

english, 2010

31

Integrating biological pathways and genomic profiles with ChiBE 2

Özgün Babur,Ugur Dogrusoz,Merve Çakır,Bülent Arman Aksoy…

Journal:

Year:

2014

Language:

english

File:

PDF, 1.93 MB

english, 2014

32

Triangle graphs

Messaoud Benantar, Uḡur Doḡrusöz, Joseph E Flaherty, Mukkai S Krishnamoorthy

Journal:

Applied Numerical Mathematics

Year:

1995

Language:

english

File:

PDF, 645 KB

english, 1995

33

PATIKAmad: Putting microarray data into pathway context

Ozgun Babur, Recep Colak, Emek Demir, Ugur Dogrusoz

Journal:

Year:

2008

Language:

english

File:

PDF, 256 KB

english, 2008

34

LibSBGN: Electronic Processing of SBGN maps

Demir, Emek, Dogrusoz, Ugur, Le Novère, Nicolas, Matsuoka, Yukiko, Sorokin, Anatoly, Funahashi, Akira, Mi, Huaiyu, Kitano, Hiroaki, Aladjem, Mirit, van Iersel, Martijn, Blinov, Michael, Boyd, Sarah, V

Journal:

Bioentrepreneur

Year:

2011

Language:

english

File:

PDF, 1.40 MB

english, 2011

35

[ACM Press the Fifteenth International Conference - Recife, Brazil (2019.09.18-2019.09.18)] Proceedings of the Fifteenth International Conference on Predictive Models and Data Analytics in Software Engineering - PROMISE'19 - Reviewer Recommendation using Software Artifact Traceability Graphs

Sülün, Emre, Tüzün, Eray, Doğrusöz, Uğur

Year:

2019

Language:

english

File:

PDF, 4.59 MB

english, 2019

36

On labeling in graph visualization

Ugur Dogrusoz, Konstantinos G. Kakoulis, Brendan Madden, Ioannis G. Tollis

Journal:

Information Sciences

Year:

2007

Language:

english

File:

PDF, 808 KB

english, 2007

37

High-Performance Liquid Chromatography with Refractive Index Detection for the Determination of Inulin in Chicory Roots

Başaran, Uğur, Akkbik, Mohammed, Mut, Hanife, Gülümser, Erdem, Doğrusöz, Medine Çopur, Koçoğlu, Serhat

Journal:

Analytical Letters

Year:

2017

Language:

english

File:

PDF, 976 KB

english, 2017

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